Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL15A1 | COL16A1 | ENSCAFP00000041171 | ENSCAFP00000060091 | Collagen type XV alpha 1 chain. | Collagen type XVI alpha 1 chain. | 0.544 |
COL15A1 | COL1A1 | ENSCAFP00000041171 | ENSCAFP00000025056 | Collagen type XV alpha 1 chain. | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | 0.628 |
COL15A1 | COL1A2 | ENSCAFP00000041171 | ENSCAFP00000029400 | Collagen type XV alpha 1 chain. | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.610 |
COL15A1 | COL2A1 | ENSCAFP00000041171 | ENSCAFP00000013330 | Collagen type XV alpha 1 chain. | Collagen type II alpha 1 chain. | 0.462 |
COL15A1 | COL5A2 | ENSCAFP00000041171 | ENSCAFP00000021860 | Collagen type XV alpha 1 chain. | Collagen type V alpha 2 chain. | 0.567 |
COL15A1 | COL5A3 | ENSCAFP00000041171 | ENSCAFP00000026524 | Collagen type XV alpha 1 chain. | Collagen type V alpha 3 chain. | 0.620 |
COL15A1 | COL6A1 | ENSCAFP00000041171 | ENSCAFP00000041957 | Collagen type XV alpha 1 chain. | Collagen type VI alpha 1 chain. | 0.659 |
COL15A1 | SOX12 | ENSCAFP00000041171 | ENSCAFP00000010358 | Collagen type XV alpha 1 chain. | Transcription factor SOX. | 0.595 |
COL16A1 | COL15A1 | ENSCAFP00000060091 | ENSCAFP00000041171 | Collagen type XVI alpha 1 chain. | Collagen type XV alpha 1 chain. | 0.544 |
COL16A1 | COL1A1 | ENSCAFP00000060091 | ENSCAFP00000025056 | Collagen type XVI alpha 1 chain. | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | 0.612 |
COL16A1 | COL1A2 | ENSCAFP00000060091 | ENSCAFP00000029400 | Collagen type XVI alpha 1 chain. | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.735 |
COL16A1 | COL2A1 | ENSCAFP00000060091 | ENSCAFP00000013330 | Collagen type XVI alpha 1 chain. | Collagen type II alpha 1 chain. | 0.635 |
COL16A1 | COL5A2 | ENSCAFP00000060091 | ENSCAFP00000021860 | Collagen type XVI alpha 1 chain. | Collagen type V alpha 2 chain. | 0.727 |
COL16A1 | COL5A3 | ENSCAFP00000060091 | ENSCAFP00000026524 | Collagen type XVI alpha 1 chain. | Collagen type V alpha 3 chain. | 0.658 |
COL16A1 | COL6A1 | ENSCAFP00000060091 | ENSCAFP00000041957 | Collagen type XVI alpha 1 chain. | Collagen type VI alpha 1 chain. | 0.726 |
COL16A1 | LAMC3 | ENSCAFP00000060091 | ENSCAFP00000040626 | Collagen type XVI alpha 1 chain. | Laminin subunit gamma 3. | 0.495 |
COL1A1 | COL15A1 | ENSCAFP00000025056 | ENSCAFP00000041171 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type XV alpha 1 chain. | 0.628 |
COL1A1 | COL16A1 | ENSCAFP00000025056 | ENSCAFP00000060091 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type XVI alpha 1 chain. | 0.612 |
COL1A1 | COL1A2 | ENSCAFP00000025056 | ENSCAFP00000029400 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.999 |
COL1A1 | COL2A1 | ENSCAFP00000025056 | ENSCAFP00000013330 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type II alpha 1 chain. | 0.571 |
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