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COL5A3 protein (Canis lupus) - STRING interaction network
"COL5A3" - Collagen, type V, alpha 3 in Canis lupus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A3Collagen, type V, alpha 3 (1749 aa)    
Predicted Functional Partners:
ADAMTS14
ADAM metallopeptidase with thrombospondin type 1 motif, 14 (1225 aa)
     
  0.966
COL6A6
Collagen, type VI, alpha 6 (2268 aa)
     
 
0.933
COL4A2
Collagen, type IV, alpha 2; Belongs to the type IV collagen family (1682 aa)
   
0.933
COL16A1
Collagen, type XVI, alpha 1 (1592 aa)
   
 
0.930
PLOD3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (740 aa)
     
  0.929
COL6A2
Collagen, type VI, alpha 2 (895 aa)
   
 
0.929
COL8A1
Collagen, type VIII, alpha 1 (744 aa)
   
0.929
COL4A4
Canis lupus familiaris collagen, type IV, alpha 4 (COL4A4), mRNA; Belongs to the type IV collagen family (1689 aa)
   
0.928
COL4A1
Collagen, type IV, alpha 1; Belongs to the type IV collagen family (1623 aa)
   
0.928
COL8A2
Collagen, type VIII, alpha 2 (698 aa)
   
0.927
Your Current Organism:
Canis lupus
NCBI taxonomy Id: 9612
Other names: C. lupus, Canis familiaris, Canis lupus, gray wolf, grey wolf
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