STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL24A1Collagen type XXIV alpha 1 chain. (1709 aa)    
Predicted Functional Partners:
KBTBD12
Kelch repeat and BTB domain containing 12.
   
  
 0.708
SUGCT
Succinyl-CoA:glutarate-CoA transferase.
   
  
 0.683
SP140
SP140 nuclear body protein.
    
 
 0.675
COL21A1
Collagen type XXI alpha 1 chain.
  
  
0.673
COL16A1
Collagen type XVI alpha 1 chain.
  
 
0.634
COL4A6
Collagen type IV alpha 6 chain.
  
 
0.618
COL23A1
Collagen type XXIII alpha 1 chain.
  
 
0.617
SLC2A13
Solute carrier family 2 member 13; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.617
COL22A1
Collagen type XXII alpha 1 chain.
  
0.611
COL6A1
Collagen type VI alpha 1 chain.
  
0.607
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.