Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGXT2 | CFHR5 | ENSCAFP00000052449 | ENSCAFP00000040477 | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Complement factor H related 5. | 0.621 |
AGXT2 | FGA | ENSCAFP00000052449 | ENSCAFP00000036232 | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Fibrinogen alpha chain; Cleaved by the protease thrombin to yield monomers which, together with fibrinogen beta (FGB) and fibrinogen gamma (FGG), polymerize to form an insoluble fibrin matrix. Fibrin has a major function in hemostasis as one of the primary components of blood clots. In addition, functions during the early stages of wound repair to stabilize the lesion and guide cell migration during re- epithelialization. Was originally thought to be essential for platelet aggregation, based on in vitro studies using anticoagulated blood. However, subsequent studies have shown that it [...] | 0.415 |
AGXT2 | HGD | ENSCAFP00000052449 | ENSCAFP00000058708 | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Homogentisate 1,2-dioxygenase. | 0.756 |
C3 | CFB | ENSCAFP00000027484 | ENSCAFP00000000985 | Complement C3. | Uncharacterized protein; Belongs to the peptidase S1 family. | 0.975 |
C3 | CFHR5 | ENSCAFP00000027484 | ENSCAFP00000040477 | Complement C3. | Complement factor H related 5. | 0.727 |
C8A | CFB | ENSCAFP00000049192 | ENSCAFP00000000985 | Complement C8 alpha chain. | Uncharacterized protein; Belongs to the peptidase S1 family. | 0.493 |
C8A | CFHR5 | ENSCAFP00000049192 | ENSCAFP00000040477 | Complement C8 alpha chain. | Complement factor H related 5. | 0.670 |
C8A | DGKE | ENSCAFP00000049192 | ENSCAFP00000025617 | Complement C8 alpha chain. | Diacylglycerol kinase. | 0.478 |
C8A | FCN1 | ENSCAFP00000049192 | ENSCAFP00000041594 | Complement C8 alpha chain. | Ficolin 1. | 0.431 |
C8A | FGA | ENSCAFP00000049192 | ENSCAFP00000036232 | Complement C8 alpha chain. | Fibrinogen alpha chain; Cleaved by the protease thrombin to yield monomers which, together with fibrinogen beta (FGB) and fibrinogen gamma (FGG), polymerize to form an insoluble fibrin matrix. Fibrin has a major function in hemostasis as one of the primary components of blood clots. In addition, functions during the early stages of wound repair to stabilize the lesion and guide cell migration during re- epithelialization. Was originally thought to be essential for platelet aggregation, based on in vitro studies using anticoagulated blood. However, subsequent studies have shown that it [...] | 0.512 |
CFB | C3 | ENSCAFP00000000985 | ENSCAFP00000027484 | Uncharacterized protein; Belongs to the peptidase S1 family. | Complement C3. | 0.975 |
CFB | C8A | ENSCAFP00000000985 | ENSCAFP00000049192 | Uncharacterized protein; Belongs to the peptidase S1 family. | Complement C8 alpha chain. | 0.493 |
CFB | CFHR5 | ENSCAFP00000000985 | ENSCAFP00000040477 | Uncharacterized protein; Belongs to the peptidase S1 family. | Complement factor H related 5. | 0.632 |
CFB | DGKE | ENSCAFP00000000985 | ENSCAFP00000025617 | Uncharacterized protein; Belongs to the peptidase S1 family. | Diacylglycerol kinase. | 0.745 |
CFB | MMACHC | ENSCAFP00000000985 | ENSCAFP00000006832 | Uncharacterized protein; Belongs to the peptidase S1 family. | Metabolism of cobalamin associated C. | 0.562 |
CFHR5 | AGXT2 | ENSCAFP00000040477 | ENSCAFP00000052449 | Complement factor H related 5. | Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.621 |
CFHR5 | C3 | ENSCAFP00000040477 | ENSCAFP00000027484 | Complement factor H related 5. | Complement C3. | 0.727 |
CFHR5 | C8A | ENSCAFP00000040477 | ENSCAFP00000049192 | Complement factor H related 5. | Complement C8 alpha chain. | 0.670 |
CFHR5 | CFB | ENSCAFP00000040477 | ENSCAFP00000000985 | Complement factor H related 5. | Uncharacterized protein; Belongs to the peptidase S1 family. | 0.632 |
CFHR5 | DGKE | ENSCAFP00000040477 | ENSCAFP00000025617 | Complement factor H related 5. | Diacylglycerol kinase. | 0.800 |
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