STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11ATNF receptor superfamily member 11a. (648 aa)    
Predicted Functional Partners:
TNFSF11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.994
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.974
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.942
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
 
    
 0.867
TAP1
Uncharacterized protein.
   
 
 0.705
TNFSF14
Tumor necrosis factor ligand 1D; Belongs to the tumor necrosis factor family.
     
 0.678
BIRC3
Baculoviral IAP repeat-containing protein 3; Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, mitogenic kinase signaling and cell proliferation, as well as cell invasion and metastasis. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and regulates both canonical and non- canonical NF-kappa-B signaling by acting in opposite directions: acts as a positive regulator of the canonical pathway and suppresses constitutive activation of non-canonical NF-kappa-B signaling. The target proteins [...]
   
 
 0.658
LTB
Tumor necrosis factor ligand 1C; Belongs to the tumor necrosis factor family.
     
 0.656
ZNF687
Zinc finger protein 687.
   
  
 0.649
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.648
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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