STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED2Transmembrane p24 trafficking protein 2. (201 aa)    
Predicted Functional Partners:
CDC42SE1
CDC42 small effector 1.
      
 0.877
TMED3
Transmembrane p24 trafficking protein 3.
   
0.850
TMED9
Transmembrane p24 trafficking protein 9.
   
0.842
TMED7
GOLD domain-containing protein.
   
0.828
ARF1
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.782
PNPLA4
Patatin like phospholipase domain containing 4.
      
 0.782
NOTCH4
Notch receptor 4.
    
 0.750
TMED11
Transmembrane emp24 domain-containing protein 11; Part of a complex whose function is to bind Ca(2+) to the ER membrane and thereby regulate the retention of ER resident proteins; Belongs to the EMP24/GP25L family.
   
 
0.749
LOC474642
GOLD domain-containing protein.
   
 
0.749
TMED4
Transmembrane p24 trafficking protein 4.
   
 
0.749
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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