Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCC | NTN1 | ENSCAFP00000000229 | ENSCAFP00000025650 | DCC netrin 1 receptor. | Netrin 1. | 0.993 |
DCC | NTN3 | ENSCAFP00000000229 | ENSCAFP00000028607 | DCC netrin 1 receptor. | Netrin 3. | 0.794 |
DCC | NTN4 | ENSCAFP00000000229 | ENSCAFP00000064153 | DCC netrin 1 receptor. | Netrin 4. | 0.834 |
DCC | PTK2 | ENSCAFP00000000229 | ENSCAFP00000051882 | DCC netrin 1 receptor. | Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.982 |
DCC | SRC | ENSCAFP00000000229 | ENSCAFP00000044994 | DCC netrin 1 receptor. | Tyrosine-protein kinase. | 0.909 |
DCC | UNC5B | ENSCAFP00000000229 | ENSCAFP00000058713 | DCC netrin 1 receptor. | Unc-5 netrin receptor B. | 0.874 |
FLRT3 | NEO1 | ENSCAFP00000034288 | ENSCAFP00000048500 | Fibronectin leucine rich transmembrane protein 3. | Neogenin 1. | 0.667 |
FLRT3 | ROBO4 | ENSCAFP00000034288 | ENSCAFP00000016293 | Fibronectin leucine rich transmembrane protein 3. | Roundabout guidance receptor 4. | 0.453 |
FLRT3 | UNC5B | ENSCAFP00000034288 | ENSCAFP00000058713 | Fibronectin leucine rich transmembrane protein 3. | Unc-5 netrin receptor B. | 0.759 |
NEO1 | FLRT3 | ENSCAFP00000048500 | ENSCAFP00000034288 | Neogenin 1. | Fibronectin leucine rich transmembrane protein 3. | 0.667 |
NEO1 | NTN1 | ENSCAFP00000048500 | ENSCAFP00000025650 | Neogenin 1. | Netrin 1. | 0.970 |
NEO1 | NTN3 | ENSCAFP00000048500 | ENSCAFP00000028607 | Neogenin 1. | Netrin 3. | 0.890 |
NEO1 | NTN4 | ENSCAFP00000048500 | ENSCAFP00000064153 | Neogenin 1. | Netrin 4. | 0.755 |
NEO1 | PTK2 | ENSCAFP00000048500 | ENSCAFP00000051882 | Neogenin 1. | Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.952 |
NEO1 | ROBO4 | ENSCAFP00000048500 | ENSCAFP00000016293 | Neogenin 1. | Roundabout guidance receptor 4. | 0.474 |
NEO1 | UNC5B | ENSCAFP00000048500 | ENSCAFP00000058713 | Neogenin 1. | Unc-5 netrin receptor B. | 0.853 |
NTN1 | DCC | ENSCAFP00000025650 | ENSCAFP00000000229 | Netrin 1. | DCC netrin 1 receptor. | 0.993 |
NTN1 | NEO1 | ENSCAFP00000025650 | ENSCAFP00000048500 | Netrin 1. | Neogenin 1. | 0.970 |
NTN1 | UNC5B | ENSCAFP00000025650 | ENSCAFP00000058713 | Netrin 1. | Unc-5 netrin receptor B. | 0.990 |
NTN3 | DCC | ENSCAFP00000028607 | ENSCAFP00000000229 | Netrin 3. | DCC netrin 1 receptor. | 0.794 |
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