STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCRAPre T cell antigen receptor alpha. (199 aa)    
Predicted Functional Partners:
VPREB1
V-set pre-B cell surrogate light chain 1.
      
 0.802
DNTT
DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.
      
 0.788
F1PJW6_CANLF
Uncharacterized protein.
    
   0.586
TRBV28
T cell receptor beta variable 28.
    
   0.586
ZAP70
Tyrosine-protein kinase.
      
 0.572
SWI5
Uncharacterized protein.
      
 0.567
BCL11B
BAF chromatin remodeling complex subunit BCL11B.
      
 0.507
TMEM145
Transmembrane protein 145.
      
 0.491
ENSCAFP00000053963
BHLH domain-containing protein.
      
 0.457
LYL1
Uncharacterized protein.
      
 0.457
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.