STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH13Cadherin 13. (455 aa)    
Predicted Functional Partners:
G1M6F2_AILME
CA domain-containing protein.
 
      0.896
LOC105234859
CA domain-containing protein.
 
   
 0.647
CTNND1
Catenin delta 1.
    
 0.611
CTNNB1
Catenin beta 1.
    
 0.571
JUP
Junction plakoglobin.
    
 0.557
ARVCF
ARVCF delta catenin family member.
    
 0.512
LOC100468630
Plakophilin 4.
    
 0.418
G1LAL1_AILME
Uncharacterized protein.
    
 0.418
G1LUU5_AILME
Uncharacterized protein.
    
 0.418
CTNND2
Uncharacterized protein.
    
 0.418
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.