STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOA1Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility (By similarity). (266 aa)    
Predicted Functional Partners:
LCAT
Lecithin-cholesterol acyltransferase.
   
 0.963
APOB
Vitellogenin domain-containing protein.
   
 0.887
APOE
Apolipoprotein E.
   
 
 0.856
APOA4
Apolipoprotein A4.
  
 
0.796
PLTP
Phospholipid transfer protein.
     
 0.768
APOA2
Apolipoprotein A2.
   
 
 0.766
APOC1
Apolipoprotein C1.
   
 
 0.710
APOC2
Uncharacterized protein.
   
 
 0.663
G1M358_AILME
Vitellogenin domain-containing protein.
   
 0.627
G1M858_AILME
Uncharacterized protein.
   
 0.627
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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