STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf112Chromosome 1 open reading frame 112. (902 aa)    
Predicted Functional Partners:
ZFYVE28
Zinc finger FYVE-type containing 28.
      
 0.702
CABIN1
Uncharacterized protein.
      
 0.633
CCDC181
Coiled-coil domain containing 181.
      
 0.626
METTL18
Methyltransferase like 18.
      
 0.604
MCM8
MCM domain-containing protein; Belongs to the MCM family.
   
  
 0.586
SLC9A5
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.573
KNTC1
Kinetochore associated 1.
   
  
 0.518
KIFAP3
Kinesin associated protein 3.
      
 0.514
BLZF1
Basic leucine zipper nuclear factor 1.
      
 0.513
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
      
 0.512
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.