STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD63Tetraspanin. (216 aa)    
Predicted Functional Partners:
SCARB2
Scavenger receptor class B member 2; Belongs to the CD36 family.
     
 0.918
LAMP2
Lysosomal associated membrane protein 2.
    
 0.747
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 
 0.708
TSG101
Tumor susceptibility 101.
      
 0.697
LAMP1
Lysosomal associated membrane protein 1.
   
 0.548
CD9
Tetraspanin.
   
 
0.537
MEF2C
Myocyte enhancer factor 2C.
      
 0.510
RAB27B
RAB27B, member RAS oncogene family.
     
 0.498
RAB27A
RAB27A, member RAS oncogene family.
     
 0.498
CD4
Ig-like domain-containing protein.
    
 0.485
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.