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DHX16 protein (Ailuropoda melanoleuca) - STRING interaction network
"DHX16" - DEAH-box helicase 16 in Ailuropoda melanoleuca
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX16DEAH-box helicase 16 (1043 aa)    
Predicted Functional Partners:
XAB2
XPA binding protein 2 (843 aa)
     
 
  0.966
CWC22
CWC22 spliceosome-associated protein (907 aa)
     
 
  0.957
SNRNP200
Small nuclear ribonucleoprotein 200kDa (U5) (2136 aa)
     
 
  0.949
EFTUD2
Elongation factor Tu GTP binding domain containing 2 (972 aa)
     
 
  0.937
SF3B2
Splicing factor 3b, subunit 2, 145kDa (897 aa)
     
 
  0.929
SF3B1
Splicing factor 3b, subunit 1, 155kDa (1305 aa)
     
 
  0.921
CRNKL1
Crooked neck pre-mRNA splicing factor 1 (828 aa)
     
 
  0.919
SF3B3
Splicing factor 3b, subunit 3, 130kDa (1220 aa)
     
 
  0.917
PRPF8
Pre-mRNA processing factor 8 (2335 aa)
     
 
  0.917
CDC40
Cell division cycle 40 (447 aa)
     
 
  0.914
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, Ailuropoda melanoleuca, giant panda
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