STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL12A1Collagen type XII alpha 1 chain. (3115 aa)    
Predicted Functional Partners:
COL4A2
Collagen type IV alpha 2 chain.
   
0.712
C2CD3
C2 domain containing 3 centriole elongation regulator.
     
 0.703
P3H2
Prolyl 3-hydroxylase 2.
    
 0.650
LOC105235301
ZnMc domain-containing protein.
   
 0.611
G1LUK6_AILME
ZnMc domain-containing protein.
   
 0.611
MMP12
ZnMc domain-containing protein.
   
 0.611
COL22A1
VWFA domain-containing protein.
    
0.608
G1LIP7_AILME
Uncharacterized protein.
    
0.608
COL1A2
Collagen type I alpha 2 chain.
   
0.600
APOB
Vitellogenin domain-containing protein.
     
 0.599
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.