STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13BFamily with sequence similarity 13 member B. (917 aa)    
Predicted Functional Partners:
SH3PXD2A
SH3 and PX domains 2A.
      
 0.748
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
      
 0.709
SPATA24
Uncharacterized protein.
      
 0.701
RASGEF1C
RasGEF domain family member 1C.
      
 0.633
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
  
 0.625
CYFIP2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.621
ATP10A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.613
BRD8
Bromo domain-containing protein.
      
 0.606
RUFY1
RUN and FYVE domain containing 1.
      
 0.530
CDC23
Cell division cycle 23.
      
 0.526
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.