Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4B | HMG20B | ENSAMEP00000009280 | ENSAMEP00000006015 | AT-rich interaction domain 4B. | High mobility group 20B. | 0.587 |
ARID4B | KDM1A | ENSAMEP00000009280 | ENSAMEP00000015737 | AT-rich interaction domain 4B. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.603 |
ARID4B | KDM1B | ENSAMEP00000009280 | ENSAMEP00000008825 | AT-rich interaction domain 4B. | Lysine demethylase 1B. | 0.603 |
ARID4B | MAOA | ENSAMEP00000009280 | ENSAMEP00000017388 | AT-rich interaction domain 4B. | Amine oxidase. | 0.603 |
ARID4B | MAOB | ENSAMEP00000009280 | ENSAMEP00000017319 | AT-rich interaction domain 4B. | Amine oxidase. | 0.603 |
ARID4B | PHF21A | ENSAMEP00000009280 | ENSAMEP00000000630 | AT-rich interaction domain 4B. | PHD finger protein 21A. | 0.658 |
ARID4B | RCOR2 | ENSAMEP00000009280 | ENSAMEP00000019133 | AT-rich interaction domain 4B. | REST corepressor 2. | 0.663 |
ARID4B | REST | ENSAMEP00000009280 | ENSAMEP00000008987 | AT-rich interaction domain 4B. | RE1 silencing transcription factor. | 0.526 |
GAMT | RCOR2 | ENSAMEP00000003532 | ENSAMEP00000019133 | Guanidinoacetate N-methyltransferase; Converts guanidinoacetate to creatine, using S- adenosylmethionine as the methyl donor. Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family. | REST corepressor 2. | 0.678 |
GTF2A2 | RCOR2 | ENSAMEP00000006048 | ENSAMEP00000019133 | General transcription factor IIA subunit 2. | REST corepressor 2. | 0.704 |
HMG20B | ARID4B | ENSAMEP00000006015 | ENSAMEP00000009280 | High mobility group 20B. | AT-rich interaction domain 4B. | 0.587 |
HMG20B | KDM1A | ENSAMEP00000006015 | ENSAMEP00000015737 | High mobility group 20B. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.959 |
HMG20B | PHF21A | ENSAMEP00000006015 | ENSAMEP00000000630 | High mobility group 20B. | PHD finger protein 21A. | 0.970 |
HMG20B | RCOR2 | ENSAMEP00000006015 | ENSAMEP00000019133 | High mobility group 20B. | REST corepressor 2. | 0.725 |
HMG20B | REST | ENSAMEP00000006015 | ENSAMEP00000008987 | High mobility group 20B. | RE1 silencing transcription factor. | 0.472 |
KDM1A | ARID4B | ENSAMEP00000015737 | ENSAMEP00000009280 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | AT-rich interaction domain 4B. | 0.603 |
KDM1A | HMG20B | ENSAMEP00000015737 | ENSAMEP00000006015 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | High mobility group 20B. | 0.959 |
KDM1A | PHF21A | ENSAMEP00000015737 | ENSAMEP00000000630 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | PHD finger protein 21A. | 0.974 |
KDM1A | RCOR2 | ENSAMEP00000015737 | ENSAMEP00000019133 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | REST corepressor 2. | 0.864 |
KDM1A | REST | ENSAMEP00000015737 | ENSAMEP00000008987 | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | RE1 silencing transcription factor. | 0.948 |
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