STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Forkhead box F1. (387 aa)    
Predicted Functional Partners:
MYOCD
Myocardin.
   
 
 0.550
PAX1
Paired box 1.
   
  
 0.535
CA12
Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.528
SRF
Serum response factor.
    
 
 0.503
GLI3
GLI family zinc finger 3.
    
 0.483
BMP4
Bone morphogenetic protein 4.
     
 0.479
HOXB5
Homeobox B5.
    
 0.471
HOXB3
Homeobox B3.
    
 0.463
GATA4
GATA binding protein 4.
   
 0.462
PRSS57
Serine protease 57; Belongs to the peptidase S1 family.
    
 0.459
Your Current Organism:
Ailuropoda melanoleuca
NCBI taxonomy Id: 9646
Other names: A. melanoleuca, giant panda
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