Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMP4 | FOXF1 | ENSAMEP00000016145 | ENSAMEP00000019304 | Bone morphogenetic protein 4. | Forkhead box F1. | 0.479 |
BMP4 | GATA4 | ENSAMEP00000016145 | ENSAMEP00000006528 | Bone morphogenetic protein 4. | GATA binding protein 4. | 0.700 |
CA12 | FOXF1 | ENSAMEP00000002447 | ENSAMEP00000019304 | Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family. | Forkhead box F1. | 0.528 |
CA12 | PAX1 | ENSAMEP00000002447 | ENSAMEP00000013303 | Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family. | Paired box 1. | 0.522 |
FOXF1 | BMP4 | ENSAMEP00000019304 | ENSAMEP00000016145 | Forkhead box F1. | Bone morphogenetic protein 4. | 0.479 |
FOXF1 | CA12 | ENSAMEP00000019304 | ENSAMEP00000002447 | Forkhead box F1. | Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family. | 0.528 |
FOXF1 | GATA4 | ENSAMEP00000019304 | ENSAMEP00000006528 | Forkhead box F1. | GATA binding protein 4. | 0.462 |
FOXF1 | GLI3 | ENSAMEP00000019304 | ENSAMEP00000008907 | Forkhead box F1. | GLI family zinc finger 3. | 0.483 |
FOXF1 | HOXB3 | ENSAMEP00000019304 | ENSAMEP00000005226 | Forkhead box F1. | Homeobox B3. | 0.463 |
FOXF1 | HOXB5 | ENSAMEP00000019304 | ENSAMEP00000005246 | Forkhead box F1. | Homeobox B5. | 0.471 |
FOXF1 | MYOCD | ENSAMEP00000019304 | ENSAMEP00000003006 | Forkhead box F1. | Myocardin. | 0.550 |
FOXF1 | PAX1 | ENSAMEP00000019304 | ENSAMEP00000013303 | Forkhead box F1. | Paired box 1. | 0.535 |
FOXF1 | PRSS57 | ENSAMEP00000019304 | ENSAMEP00000002993 | Forkhead box F1. | Serine protease 57; Belongs to the peptidase S1 family. | 0.459 |
FOXF1 | SRF | ENSAMEP00000019304 | ENSAMEP00000013115 | Forkhead box F1. | Serum response factor. | 0.503 |
GATA4 | BMP4 | ENSAMEP00000006528 | ENSAMEP00000016145 | GATA binding protein 4. | Bone morphogenetic protein 4. | 0.700 |
GATA4 | FOXF1 | ENSAMEP00000006528 | ENSAMEP00000019304 | GATA binding protein 4. | Forkhead box F1. | 0.462 |
GATA4 | MYOCD | ENSAMEP00000006528 | ENSAMEP00000003006 | GATA binding protein 4. | Myocardin. | 0.530 |
GATA4 | SRF | ENSAMEP00000006528 | ENSAMEP00000013115 | GATA binding protein 4. | Serum response factor. | 0.460 |
GLI3 | FOXF1 | ENSAMEP00000008907 | ENSAMEP00000019304 | GLI family zinc finger 3. | Forkhead box F1. | 0.483 |
HOXB3 | FOXF1 | ENSAMEP00000005226 | ENSAMEP00000019304 | Homeobox B3. | Forkhead box F1. | 0.463 |
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