STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dole_2501PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: drm:Dred_2273 aldehyde ferredoxin oxidoreductase. (575 aa)    
Predicted Functional Partners:
Dole_2289
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: tpe:Tpen_0176 aldehyde ferredoxin oxidoreductase.
  
  
 
0.928
Dole_1771
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: mem:Memar_0339 aldehyde ferredoxin oxidoreductase.
  
  
 
0.926
Dole_1573
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: sus:Acid_0778 hydroxypyruvate reductase.
     
  0.900
Dole_2503
PFAM: thiamineS protein; KEGG: dde:Dde_2458 hypothetical protein.
 
   
 0.867
Dole_0684
Molybdenum cofactor synthesis domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.759
Dole_2631
KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein.
 
   
 0.744
Dole_2504
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sfu:Sfum_2082 UBA/ThiF-type NAD/FAD binding protein.
 
     0.733
Dole_1695
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_3864 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
 
 0.699
Dole_2502
PFAM: thiamineS protein; KEGG: drm:Dred_2272 hypothetical protein.
 
     0.683
Dole_0369
TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: pca:Pcar_0674 periplasmic molybdate-binding protein/domain.
 
     0.668
Your Current Organism:
Desulfococcus oleovorans
NCBI taxonomy Id: 96561
Other names: D. oleovorans Hxd3, Desulfobacteirum oleovorans Hxd3, Desulfococcus oleovorans Hxd3, delta proteobacterium Hxd3, sulfate-reducing bacterium Hxd3
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.