STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRF6Interferon regulatory factor 6. (462 aa)    
Predicted Functional Partners:
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.659
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.624
SASH1
SAM and SH3 domain containing 1.
  
   
 0.569
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.558
GRHL3
Grainyhead like transcription factor 3.
      
 0.521
ADM
Adrenomedullin.
      
 0.512
MYD88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.470
IQUB
IQ motif and ubiquitin domain containing.
      
 0.452
ARHGAP29
Rho GTPase activating protein 29.
   
  
 0.437
OVOL1
Ovo like transcriptional repressor 1.
   
  
 0.436
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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