Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHERP | DDX46 | ENSMPUP00000015917 | ENSMPUP00000009970 | Calcium homeostasis endoplasmic reticulum protein. | DEAD-box helicase 46. | 0.927 |
CHERP | DHX15 | ENSMPUP00000015917 | ENSMPUP00000016631 | Calcium homeostasis endoplasmic reticulum protein. | DEAH-box helicase 15. | 0.977 |
CHERP | PHF5A | ENSMPUP00000015917 | ENSMPUP00000016294 | Calcium homeostasis endoplasmic reticulum protein. | PHD finger protein 5A. | 0.944 |
CHERP | PUF60 | ENSMPUP00000015917 | ENSMPUP00000008078 | Calcium homeostasis endoplasmic reticulum protein. | Poly(U) binding splicing factor 60. | 0.933 |
CHERP | RBM17 | ENSMPUP00000015917 | ENSMPUP00000016256 | Calcium homeostasis endoplasmic reticulum protein. | RNA binding motif protein 17. | 0.987 |
CHERP | SF3B3 | ENSMPUP00000015917 | ENSMPUP00000010203 | Calcium homeostasis endoplasmic reticulum protein. | Splicing factor 3b subunit 3. | 0.733 |
CHERP | SMNDC1 | ENSMPUP00000015917 | ENSMPUP00000002068 | Calcium homeostasis endoplasmic reticulum protein. | Survival motor neuron domain containing 1. | 0.917 |
CHERP | SNRPA1 | ENSMPUP00000015917 | ENSMPUP00000010851 | Calcium homeostasis endoplasmic reticulum protein. | Small nuclear ribonucleoprotein polypeptide A. | 0.917 |
CHERP | U2SURP | ENSMPUP00000015917 | ENSMPUP00000011762 | Calcium homeostasis endoplasmic reticulum protein. | U2 snRNP associated SURP domain containing. | 0.988 |
DDX46 | CHERP | ENSMPUP00000009970 | ENSMPUP00000015917 | DEAD-box helicase 46. | Calcium homeostasis endoplasmic reticulum protein. | 0.927 |
DDX46 | DHX15 | ENSMPUP00000009970 | ENSMPUP00000016631 | DEAD-box helicase 46. | DEAH-box helicase 15. | 0.954 |
DDX46 | PHF5A | ENSMPUP00000009970 | ENSMPUP00000016294 | DEAD-box helicase 46. | PHD finger protein 5A. | 0.991 |
DDX46 | PUF60 | ENSMPUP00000009970 | ENSMPUP00000008078 | DEAD-box helicase 46. | Poly(U) binding splicing factor 60. | 0.916 |
DDX46 | RBM17 | ENSMPUP00000009970 | ENSMPUP00000016256 | DEAD-box helicase 46. | RNA binding motif protein 17. | 0.930 |
DDX46 | SF3B3 | ENSMPUP00000009970 | ENSMPUP00000010203 | DEAD-box helicase 46. | Splicing factor 3b subunit 3. | 0.985 |
DDX46 | SMNDC1 | ENSMPUP00000009970 | ENSMPUP00000002068 | DEAD-box helicase 46. | Survival motor neuron domain containing 1. | 0.945 |
DDX46 | SNRPA1 | ENSMPUP00000009970 | ENSMPUP00000010851 | DEAD-box helicase 46. | Small nuclear ribonucleoprotein polypeptide A. | 0.988 |
DDX46 | U2SURP | ENSMPUP00000009970 | ENSMPUP00000011762 | DEAD-box helicase 46. | U2 snRNP associated SURP domain containing. | 0.943 |
DHX15 | CHERP | ENSMPUP00000016631 | ENSMPUP00000015917 | DEAH-box helicase 15. | Calcium homeostasis endoplasmic reticulum protein. | 0.977 |
DHX15 | DDX46 | ENSMPUP00000016631 | ENSMPUP00000009970 | DEAH-box helicase 15. | DEAD-box helicase 46. | 0.954 |
page 1 of 5