Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRD3 | EP300 | ENSMPUP00000012092 | ENSMPUP00000016323 | Bromodomain containing 3. | E1A binding protein p300. | 0.453 |
BRD3 | GATA1 | ENSMPUP00000012092 | ENSMPUP00000013553 | Bromodomain containing 3. | GATA binding protein 1. | 0.759 |
EP300 | BRD3 | ENSMPUP00000016323 | ENSMPUP00000012092 | E1A binding protein p300. | Bromodomain containing 3. | 0.453 |
EP300 | GATA1 | ENSMPUP00000016323 | ENSMPUP00000013553 | E1A binding protein p300. | GATA binding protein 1. | 0.740 |
EP300 | M3YA03_MUSPF | ENSMPUP00000016323 | ENSMPUP00000008160 | E1A binding protein p300. | Uncharacterized protein. | 0.455 |
EP300 | TAL1 | ENSMPUP00000016323 | ENSMPUP00000012316 | E1A binding protein p300. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.472 |
GATA1 | BRD3 | ENSMPUP00000013553 | ENSMPUP00000012092 | GATA binding protein 1. | Bromodomain containing 3. | 0.759 |
GATA1 | EP300 | ENSMPUP00000013553 | ENSMPUP00000016323 | GATA binding protein 1. | E1A binding protein p300. | 0.740 |
GATA1 | GFI1B | ENSMPUP00000013553 | ENSMPUP00000012395 | GATA binding protein 1. | Growth factor independent 1B transcriptional repressor. | 0.791 |
GATA1 | KLF1 | ENSMPUP00000013553 | ENSMPUP00000004508 | GATA binding protein 1. | Kruppel like factor 1. | 0.785 |
GATA1 | LDB1 | ENSMPUP00000013553 | ENSMPUP00000016784 | GATA binding protein 1. | LIM domain binding 1. | 0.912 |
GATA1 | LMO2 | ENSMPUP00000013553 | ENSMPUP00000011438 | GATA binding protein 1. | LIM domain only 2. | 0.986 |
GATA1 | M3YA03_MUSPF | ENSMPUP00000013553 | ENSMPUP00000008160 | GATA binding protein 1. | Uncharacterized protein. | 0.977 |
GATA1 | NKX2-5 | ENSMPUP00000013553 | ENSMPUP00000012613 | GATA binding protein 1. | NK2 homeobox 5. | 0.678 |
GATA1 | TAL1 | ENSMPUP00000013553 | ENSMPUP00000012316 | GATA binding protein 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.974 |
GATA1 | ZFPM2 | ENSMPUP00000013553 | ENSMPUP00000005934 | GATA binding protein 1. | Zinc finger protein, FOG family member 2. | 0.687 |
GFI1B | GATA1 | ENSMPUP00000012395 | ENSMPUP00000013553 | Growth factor independent 1B transcriptional repressor. | GATA binding protein 1. | 0.791 |
GFI1B | KLF1 | ENSMPUP00000012395 | ENSMPUP00000004508 | Growth factor independent 1B transcriptional repressor. | Kruppel like factor 1. | 0.470 |
GFI1B | LDB1 | ENSMPUP00000012395 | ENSMPUP00000016784 | Growth factor independent 1B transcriptional repressor. | LIM domain binding 1. | 0.571 |
GFI1B | LMO2 | ENSMPUP00000012395 | ENSMPUP00000011438 | Growth factor independent 1B transcriptional repressor. | LIM domain only 2. | 0.655 |
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