STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARIH1RBR-type E3 ubiquitin transferase. (559 aa)    
Predicted Functional Partners:
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.952
RBX1
Ring-box 1.
    
 0.942
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.936
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.920
M3Y374_MUSPF
Ubiquitin-like domain-containing protein.
    
 0.913
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.889
M3YFD0_MUSPF
Uncharacterized protein.
    
 0.883
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.882
CDKN1B
Cyclin dependent kinase inhibitor 1B.
    
  0.836
M3Z4W8_MUSPF
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.714
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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