Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC37 | LRRK2 | ENSMPUP00000006629 | ENSMPUP00000000233 | Cell division cycle 37. | Leucine rich repeat kinase 2. | 0.671 |
CDC37 | PINK1 | ENSMPUP00000006629 | ENSMPUP00000015995 | Cell division cycle 37. | PTEN induced kinase 1. | 0.679 |
DNM1L | LRRK2 | ENSMPUP00000000219 | ENSMPUP00000000233 | Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Leucine rich repeat kinase 2. | 0.659 |
DNM1L | PINK1 | ENSMPUP00000000219 | ENSMPUP00000015995 | Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | PTEN induced kinase 1. | 0.731 |
LRRK2 | CDC37 | ENSMPUP00000000233 | ENSMPUP00000006629 | Leucine rich repeat kinase 2. | Cell division cycle 37. | 0.671 |
LRRK2 | DNM1L | ENSMPUP00000000233 | ENSMPUP00000000219 | Leucine rich repeat kinase 2. | Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.659 |
LRRK2 | M3YJA7_MUSPF | ENSMPUP00000000233 | ENSMPUP00000011414 | Leucine rich repeat kinase 2. | 14_3_3 domain-containing protein; Belongs to the 14-3-3 family. | 0.838 |
LRRK2 | MBP | ENSMPUP00000000233 | ENSMPUP00000016538 | Leucine rich repeat kinase 2. | Myelin basic protein. | 0.612 |
LRRK2 | MSN | ENSMPUP00000000233 | ENSMPUP00000001158 | Leucine rich repeat kinase 2. | Moesin. | 0.787 |
LRRK2 | PINK1 | ENSMPUP00000000233 | ENSMPUP00000015995 | Leucine rich repeat kinase 2. | PTEN induced kinase 1. | 0.708 |
LRRK2 | RAB29 | ENSMPUP00000000233 | ENSMPUP00000011870 | Leucine rich repeat kinase 2. | RAB29, member RAS oncogene family. | 0.729 |
LRRK2 | SFN | ENSMPUP00000000233 | ENSMPUP00000018696 | Leucine rich repeat kinase 2. | 14_3_3 domain-containing protein; Belongs to the 14-3-3 family. | 0.838 |
LRRK2 | YWHAQ | ENSMPUP00000000233 | ENSMPUP00000013154 | Leucine rich repeat kinase 2. | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta; Belongs to the 14-3-3 family. | 0.717 |
LRRK2 | YWHAZ | ENSMPUP00000000233 | ENSMPUP00000015049 | Leucine rich repeat kinase 2. | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family. | 0.624 |
M3YJA7_MUSPF | LRRK2 | ENSMPUP00000011414 | ENSMPUP00000000233 | 14_3_3 domain-containing protein; Belongs to the 14-3-3 family. | Leucine rich repeat kinase 2. | 0.838 |
M3YJA7_MUSPF | YWHAQ | ENSMPUP00000011414 | ENSMPUP00000013154 | 14_3_3 domain-containing protein; Belongs to the 14-3-3 family. | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta; Belongs to the 14-3-3 family. | 0.529 |
M3YJA7_MUSPF | YWHAZ | ENSMPUP00000011414 | ENSMPUP00000015049 | 14_3_3 domain-containing protein; Belongs to the 14-3-3 family. | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family. | 0.653 |
MBP | LRRK2 | ENSMPUP00000016538 | ENSMPUP00000000233 | Myelin basic protein. | Leucine rich repeat kinase 2. | 0.612 |
MSN | LRRK2 | ENSMPUP00000001158 | ENSMPUP00000000233 | Moesin. | Leucine rich repeat kinase 2. | 0.787 |
PINK1 | CDC37 | ENSMPUP00000015995 | ENSMPUP00000006629 | PTEN induced kinase 1. | Cell division cycle 37. | 0.679 |
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