STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1FProtein phosphatase, Mg2+/Mn2+ dependent 1F. (440 aa)    
Predicted Functional Partners:
FGD1
FYVE, RhoGEF and PH domain containing 1.
      
 0.727
M3YRA3_MUSPF
WH2 domain-containing protein.
      
 0.694
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
   
  
 0.653
YPEL1
Protein yippee-like; Belongs to the yippee family.
   
 
 0.651
ZFYVE19
Zinc finger FYVE-type containing 19.
    
 
 0.642
CTDSP2
CTD small phosphatase 2.
   
 
 0.631
CCDC92
Coiled-coil domain containing 92.
      
 0.630
LCP1
Lymphocyte cytosolic protein 1.
   
  
 0.616
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.597
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
   
 
 0.541
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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