STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX4DEAD-box helicase 4; Belongs to the DEAD box helicase family. (730 aa)    
Predicted Functional Partners:
RANBP9
RAN binding protein 9.
    
 
 0.995
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.802
PRPF6
Pre-mRNA processing factor 6.
   
 0.792
DAZL
Deleted in azoospermia like.
   
 0.787
STRA8
Stimulated by retinoic acid 8.
      
 0.776
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.759
CDC5L
Cell division cycle 5 like.
    
 0.729
GDF9
Growth differentiation factor 9.
   
  
 0.698
PDGFD
Platelet derived growth factor D.
      
 0.696
M3YGU3_MUSPF
Uncharacterized protein.
   
 
 0.689
Your Current Organism:
Mustela putorius
NCBI taxonomy Id: 9669
Other names: M. putorius furo, Mustela furo, Mustela putorius furo, black ferret, domestic ferret, ferret
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