STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_1500Hypothetical protein. (580 aa)    
Predicted Functional Partners:
Tchl_1499
Hypothetical protein.
 
    0.938
Tchl_1502
BNR repeat protein.
 
    0.913
Tchl_1501
RND transport protein.
 
    0.899
Tchl_1413
Hypothetical protein.
 
    0.871
Tchl_1593
DUF1329 protein.
 
    0.871
Tchl_1414
BNR repeat protein.
 
    0.823
Tchl_1592
BNR repeat protein.
 
    0.823
Tchl_1415
Transport protein.
 
    0.780
Tchl_1591
RND family transporter.
 
    0.780
Tchl_3038
Hypothetical protein.
  
     0.494
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.