STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tchl_3417oxoacyl-CoA hydrolase MbdY. (379 aa)    
Predicted Functional Partners:
Tchl_3418
hydroxyacyl-CoA dehydrogenase MbdX.
 
  
 0.993
Tchl_2144
6-hydroxycylohex-1-en-1-carbonyl-CoA dehydrogenase.
  
  
 0.976
Tchl_3416
dienoyl-CoA hydratase MbdW.
 
     0.941
Tchl_0710
3-hydroxyacyl-CoA dehydrogenase.
  
 0.917
Tchl_2145
6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase.
  
  
 
0.901
Tchl_2148
Type I benzoyl-CoA reductase BcrB subunit.
 
     0.777
Tchl_2146
cyclohexa-1,5-diene-1-carboxyl-CoA hydratase.
 
     0.775
Tchl_2147
Type I benzoyl-CoA reductase BcrC subunit.
 
     0.772
Tchl_3421
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.770
Tchl_3426
3-methylbenzoyl-CoA reductase beta subunit MbdO.
 
     0.755
Your Current Organism:
Thauera chlorobenzoica
NCBI taxonomy Id: 96773
Other names: ATCC 700723, CIP 107679, DSM 18012, KCTC 12933, T. chlorobenzoica, Thauera aromatica genomovar chlorobenzoica, Thauera chlorobenzoica Song et al. 2001, strain 3CB-1
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