Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARL13B | IFT140 | ENSFCAP00000025313 | ENSFCAP00000009891 | ADP ribosylation factor like GTPase 13B. | Intraflagellar transport 140. | 0.593 |
ARL13B | TTC21B | ENSFCAP00000025313 | ENSFCAP00000058867 | ADP ribosylation factor like GTPase 13B. | Tetratricopeptide repeat domain 21B. | 0.513 |
ARL13B | TUB | ENSFCAP00000025313 | ENSFCAP00000046676 | ADP ribosylation factor like GTPase 13B. | Tubby-like protein; Belongs to the TUB family. | 0.554 |
ARL13B | WDR19 | ENSFCAP00000025313 | ENSFCAP00000042146 | ADP ribosylation factor like GTPase 13B. | WD repeat domain 19. | 0.552 |
GAB3 | TUB | ENSFCAP00000017658 | ENSFCAP00000046676 | GRB2 associated binding protein 3. | Tubby-like protein; Belongs to the TUB family. | 0.602 |
GAS8 | TUB | ENSFCAP00000057907 | ENSFCAP00000046676 | Growth arrest specific 8. | Tubby-like protein; Belongs to the TUB family. | 0.577 |
IFT122 | IFT140 | ENSFCAP00000034547 | ENSFCAP00000009891 | Intraflagellar transport 122. | Intraflagellar transport 140. | 0.999 |
IFT122 | TTC21B | ENSFCAP00000034547 | ENSFCAP00000058867 | Intraflagellar transport 122. | Tetratricopeptide repeat domain 21B. | 0.997 |
IFT122 | TUB | ENSFCAP00000034547 | ENSFCAP00000046676 | Intraflagellar transport 122. | Tubby-like protein; Belongs to the TUB family. | 0.627 |
IFT122 | WDR19 | ENSFCAP00000034547 | ENSFCAP00000042146 | Intraflagellar transport 122. | WD repeat domain 19. | 0.999 |
IFT122 | WDR35 | ENSFCAP00000034547 | ENSFCAP00000030726 | Intraflagellar transport 122. | WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking. | 0.999 |
IFT140 | ARL13B | ENSFCAP00000009891 | ENSFCAP00000025313 | Intraflagellar transport 140. | ADP ribosylation factor like GTPase 13B. | 0.593 |
IFT140 | IFT122 | ENSFCAP00000009891 | ENSFCAP00000034547 | Intraflagellar transport 140. | Intraflagellar transport 122. | 0.999 |
IFT140 | TTC21B | ENSFCAP00000009891 | ENSFCAP00000058867 | Intraflagellar transport 140. | Tetratricopeptide repeat domain 21B. | 0.994 |
IFT140 | TUB | ENSFCAP00000009891 | ENSFCAP00000046676 | Intraflagellar transport 140. | Tubby-like protein; Belongs to the TUB family. | 0.677 |
IFT140 | WDR19 | ENSFCAP00000009891 | ENSFCAP00000042146 | Intraflagellar transport 140. | WD repeat domain 19. | 0.998 |
IFT140 | WDR35 | ENSFCAP00000009891 | ENSFCAP00000030726 | Intraflagellar transport 140. | WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking. | 0.998 |
PGAM1 | TPI1 | ENSFCAP00000040202 | ENSFCAP00000023203 | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Triosephosphate isomerase. | 0.969 |
PGAM1 | TUB | ENSFCAP00000040202 | ENSFCAP00000046676 | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | Tubby-like protein; Belongs to the TUB family. | 0.543 |
TPI1 | PGAM1 | ENSFCAP00000023203 | ENSFCAP00000040202 | Triosephosphate isomerase. | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.969 |
page 1 of 3