STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP100SP100 nuclear antigen. (826 aa)    
Predicted Functional Partners:
RUBCNL
Rubicon like autophagy enhancer.
   
    0.834
CC1H1orf109
Chromosome C1 C1orf109 homolog.
   
    0.824
CWC25
CWC25 spliceosome associated protein homolog.
   
   0.813
LIX1
Uncharacterized protein.
   
    0.813
ACOT11
Acyl-CoA thioesterase 11.
   
    0.811
SLCO1A2
Solute carrier organic anion transporter family member.
   
    0.807
LOC101096989
Uncharacterized protein.
   
    0.806
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.708
M3W5I9_FELCA
Uncharacterized protein.
   
    0.708
RDH13
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.685
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.