Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSFCAP00000026617 | JOSD2 | ENSFCAP00000026617 | ENSFCAP00000030124 | Ubiquitin-like domain-containing protein. | Josephin domain containing 2. | 0.828 |
ENSFCAP00000026617 | LOC109502223 | ENSFCAP00000026617 | ENSFCAP00000032729 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.996 |
ENSFCAP00000026617 | MPND | ENSFCAP00000026617 | ENSFCAP00000021649 | Ubiquitin-like domain-containing protein. | MPN domain containing. | 0.505 |
ENSFCAP00000026617 | RPS27A | ENSFCAP00000026617 | ENSFCAP00000018695 | Ubiquitin-like domain-containing protein. | Ribosomal protein S27a. | 0.996 |
ENSFCAP00000026617 | UBA52 | ENSFCAP00000026617 | ENSFCAP00000009037 | Ubiquitin-like domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.998 |
ENSFCAP00000026617 | USP11 | ENSFCAP00000026617 | ENSFCAP00000050778 | Ubiquitin-like domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.552 |
ENSFCAP00000026617 | USP44 | ENSFCAP00000026617 | ENSFCAP00000043941 | Ubiquitin-like domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.459 |
ENSFCAP00000026617 | USP47 | ENSFCAP00000026617 | ENSFCAP00000017283 | Ubiquitin-like domain-containing protein. | Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. | 0.419 |
FBXO45 | JOSD2 | ENSFCAP00000030037 | ENSFCAP00000030124 | F-box protein 45. | Josephin domain containing 2. | 0.621 |
JOSD2 | ENSFCAP00000026617 | ENSFCAP00000030124 | ENSFCAP00000026617 | Josephin domain containing 2. | Ubiquitin-like domain-containing protein. | 0.828 |
JOSD2 | FBXO45 | ENSFCAP00000030124 | ENSFCAP00000030037 | Josephin domain containing 2. | F-box protein 45. | 0.621 |
JOSD2 | LOC109502223 | ENSFCAP00000030124 | ENSFCAP00000032729 | Josephin domain containing 2. | Ubiquitin-like domain-containing protein. | 0.745 |
JOSD2 | MPND | ENSFCAP00000030124 | ENSFCAP00000021649 | Josephin domain containing 2. | MPN domain containing. | 0.663 |
JOSD2 | RPS27A | ENSFCAP00000030124 | ENSFCAP00000018695 | Josephin domain containing 2. | Ribosomal protein S27a. | 0.745 |
JOSD2 | UBA52 | ENSFCAP00000030124 | ENSFCAP00000009037 | Josephin domain containing 2. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.833 |
JOSD2 | USP11 | ENSFCAP00000030124 | ENSFCAP00000050778 | Josephin domain containing 2. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.624 |
JOSD2 | USP44 | ENSFCAP00000030124 | ENSFCAP00000043941 | Josephin domain containing 2. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.660 |
JOSD2 | USP47 | ENSFCAP00000030124 | ENSFCAP00000017283 | Josephin domain containing 2. | Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. | 0.607 |
JOSD2 | USP50 | ENSFCAP00000030124 | ENSFCAP00000007975 | Josephin domain containing 2. | Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. | 0.667 |
LOC109502223 | ENSFCAP00000026617 | ENSFCAP00000032729 | ENSFCAP00000026617 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.996 |
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