STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKIRIN1Akirin 1. (192 aa)    
Predicted Functional Partners:
LMTK3
Lemur tyrosine kinase 3.
    
 
 0.579
PSMA5
Proteasome subunit alpha type.
    
   0.555
PSMA1
Proteasome subunit alpha type.
    
   0.548
AKIRIN2
Akirin 2.
  
 
  
0.543
PSMA4
Proteasome subunit alpha type.
    
   0.526
PSMB2
Proteasome subunit beta.
    
   0.525
FOXN2
Forkhead box N2.
    
 
 0.523
KIAA2012
Uncharacterized protein.
    
   0.468
PSMA2
Proteasome subunit alpha type.
    
   0.468
PSMA6
Proteasome subunit alpha type.
    
   0.456
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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