STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD2PiggyBac transposable element derived 2. (592 aa)    
Predicted Functional Partners:
ZBED8
Zinc finger BED-type containing 8.
  
   
 0.771
ZNF862
Zinc finger protein 862.
  
   
 0.705
PGBD5
PiggyBac transposable element derived 5.
    
 
 0.659
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
     
 0.653
POGK
Pogo transposable element derived with KRAB domain.
    
 
 0.652
GNL1
G protein nucleolar 1 (putative).
    
 
 0.640
THAP9
THAP domain containing 9.
      
 0.595
LOC101088560
Uncharacterized protein.
   
 0.594
ZNF385D
Zinc finger protein 385D.
      
 0.568
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.544
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.