Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALYREF | EIF4A3 | ENSFCAP00000029154 | ENSFCAP00000007643 | Aly/REF export factor. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.997 |
ALYREF | MAGOH | ENSFCAP00000029154 | ENSFCAP00000023407 | Aly/REF export factor. | Mago homolog, exon junction complex subunit. | 0.949 |
ALYREF | RBM8A | ENSFCAP00000029154 | ENSFCAP00000039546 | Aly/REF export factor. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.898 |
ALYREF | SRSF1 | ENSFCAP00000029154 | ENSFCAP00000002075 | Aly/REF export factor. | Uncharacterized protein. | 0.954 |
ALYREF | THRA | ENSFCAP00000029154 | ENSFCAP00000053212 | Aly/REF export factor. | Thyroid hormone receptor alpha. | 0.666 |
ALYREF | UPF3A | ENSFCAP00000029154 | ENSFCAP00000013544 | Aly/REF export factor. | UPF3A regulator of nonsense mediated mRNA decay. | 0.868 |
ALYREF | UPF3B | ENSFCAP00000029154 | ENSFCAP00000027416 | Aly/REF export factor. | UPF3B regulator of nonsense mediated mRNA decay. | 0.968 |
EIF4A3 | ALYREF | ENSFCAP00000007643 | ENSFCAP00000029154 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Aly/REF export factor. | 0.997 |
EIF4A3 | MAGOH | ENSFCAP00000007643 | ENSFCAP00000023407 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Mago homolog, exon junction complex subunit. | 0.996 |
EIF4A3 | PYM1 | ENSFCAP00000007643 | ENSFCAP00000012952 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | PYM homolog 1, exon junction complex associated factor. | 0.711 |
EIF4A3 | RBM8A | ENSFCAP00000007643 | ENSFCAP00000039546 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
EIF4A3 | SRSF1 | ENSFCAP00000007643 | ENSFCAP00000002075 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.986 |
EIF4A3 | THRA | ENSFCAP00000007643 | ENSFCAP00000053212 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Thyroid hormone receptor alpha. | 0.999 |
EIF4A3 | UPF2 | ENSFCAP00000007643 | ENSFCAP00000020411 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF2 regulator of nonsense mediated mRNA decay. | 0.865 |
EIF4A3 | UPF3A | ENSFCAP00000007643 | ENSFCAP00000013544 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF3A regulator of nonsense mediated mRNA decay. | 0.933 |
EIF4A3 | UPF3B | ENSFCAP00000007643 | ENSFCAP00000027416 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF3B regulator of nonsense mediated mRNA decay. | 0.972 |
IPO13 | MAGOH | ENSFCAP00000006029 | ENSFCAP00000023407 | Importin 13. | Mago homolog, exon junction complex subunit. | 0.921 |
IPO13 | RBM8A | ENSFCAP00000006029 | ENSFCAP00000039546 | Importin 13. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.925 |
MAGOH | ALYREF | ENSFCAP00000023407 | ENSFCAP00000029154 | Mago homolog, exon junction complex subunit. | Aly/REF export factor. | 0.949 |
MAGOH | EIF4A3 | ENSFCAP00000023407 | ENSFCAP00000007643 | Mago homolog, exon junction complex subunit. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.996 |
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