Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APLF | NHEJ1 | ENSFCAP00000034076 | ENSFCAP00000030062 | Aprataxin and PNKP like factor. | Non-homologous end joining factor 1. | 0.619 |
APLF | SIM2 | ENSFCAP00000034076 | ENSFCAP00000023576 | Aprataxin and PNKP like factor. | SIM bHLH transcription factor 2. | 0.577 |
APLF | XRCC4 | ENSFCAP00000034076 | ENSFCAP00000026852 | Aprataxin and PNKP like factor. | X-ray repair cross complementing 4. | 0.504 |
ARNT | ARNT2 | ENSFCAP00000037022 | ENSFCAP00000044049 | Aryl hydrocarbon receptor nuclear translocator. | Aryl hydrocarbon receptor nuclear translocator 2. | 0.901 |
ARNT | SIM2 | ENSFCAP00000037022 | ENSFCAP00000023576 | Aryl hydrocarbon receptor nuclear translocator. | SIM bHLH transcription factor 2. | 0.616 |
ARNT2 | ARNT | ENSFCAP00000044049 | ENSFCAP00000037022 | Aryl hydrocarbon receptor nuclear translocator 2. | Aryl hydrocarbon receptor nuclear translocator. | 0.901 |
ARNT2 | SIM2 | ENSFCAP00000044049 | ENSFCAP00000023576 | Aryl hydrocarbon receptor nuclear translocator 2. | SIM bHLH transcription factor 2. | 0.616 |
BEGAIN | SIM2 | ENSFCAP00000045686 | ENSFCAP00000023576 | Brain enriched guanylate kinase associated. | SIM bHLH transcription factor 2. | 0.459 |
EHF | SIM2 | ENSFCAP00000050016 | ENSFCAP00000023576 | Uncharacterized protein. | SIM bHLH transcription factor 2. | 0.455 |
ENSFCAP00000048958 | SIM2 | ENSFCAP00000048958 | ENSFCAP00000023576 | BHLH domain-containing protein. | SIM bHLH transcription factor 2. | 0.616 |
ERN2 | SIM2 | ENSFCAP00000027867 | ENSFCAP00000023576 | Endoplasmic reticulum to nucleus signaling 2. | SIM bHLH transcription factor 2. | 0.541 |
NHEJ1 | APLF | ENSFCAP00000030062 | ENSFCAP00000034076 | Non-homologous end joining factor 1. | Aprataxin and PNKP like factor. | 0.619 |
NHEJ1 | SIM2 | ENSFCAP00000030062 | ENSFCAP00000023576 | Non-homologous end joining factor 1. | SIM bHLH transcription factor 2. | 0.611 |
NHEJ1 | XRCC4 | ENSFCAP00000030062 | ENSFCAP00000026852 | Non-homologous end joining factor 1. | X-ray repair cross complementing 4. | 0.681 |
SIM2 | APLF | ENSFCAP00000023576 | ENSFCAP00000034076 | SIM bHLH transcription factor 2. | Aprataxin and PNKP like factor. | 0.577 |
SIM2 | ARNT | ENSFCAP00000023576 | ENSFCAP00000037022 | SIM bHLH transcription factor 2. | Aryl hydrocarbon receptor nuclear translocator. | 0.616 |
SIM2 | ARNT2 | ENSFCAP00000023576 | ENSFCAP00000044049 | SIM bHLH transcription factor 2. | Aryl hydrocarbon receptor nuclear translocator 2. | 0.616 |
SIM2 | BEGAIN | ENSFCAP00000023576 | ENSFCAP00000045686 | SIM bHLH transcription factor 2. | Brain enriched guanylate kinase associated. | 0.459 |
SIM2 | EHF | ENSFCAP00000023576 | ENSFCAP00000050016 | SIM bHLH transcription factor 2. | Uncharacterized protein. | 0.455 |
SIM2 | ENSFCAP00000048958 | ENSFCAP00000023576 | ENSFCAP00000048958 | SIM bHLH transcription factor 2. | BHLH domain-containing protein. | 0.616 |
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