STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX6-1NK6 homeobox 1. (367 aa)    
Predicted Functional Partners:
FOXA2
Forkhead box A2.
      
 0.718
ENSFCAP00000044386
Uncharacterized protein.
      
 0.692
FAP
Fibroblast activation protein alpha; Belongs to the peptidase S9B family.
      
 0.675
SOX17
SRY-box transcription factor 17.
      
 0.551
OTUD4
OTU deubiquitinase 4.
      
 0.516
PTF1A
Pancreas associated transcription factor 1a.
      
 0.513
MCF2L
MCF.2 cell line derived transforming sequence like.
      
 0.512
UCN3
Urocortin 3.
   
  
 0.511
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
      
 0.510
SST
Somatostatin.
   
  
 0.508
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.