STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM208Transmembrane protein 208. (173 aa)    
Predicted Functional Partners:
SWI5
LOW QUALITY PROTEIN: DNA repair protein SWI5 homolog.
   
 
 0.920
FBXL8
F-box/LRR-repeat protein 8.
      
 0.841
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
   0.808
ATG9B
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
   0.808
CACNA2D2
Voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1.
      
 0.729
ARFGEF1
Brefeldin A-inhibited guanine nucleotide-exchange protein 1.
      
 0.719
SYNCRIP
Heterogeneous nuclear ribonucleoprotein Q isoform X1.
      
 0.705
CCDC84
Coiled-coil domain-containing protein 84.
      
 0.698
RBM42
RNA-binding protein 42 isoform X1.
      
 0.674
MRGBP
MRG/MORF4L-binding protein.
      
 0.648
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.