STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUDS3Sin3 histone deacetylase corepressor complex component SDS3. (328 aa)    
Predicted Functional Partners:
SAP30
Histone deacetylase complex subunit SAP30 isoform X1.
   
 0.990
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.985
SAP18
Histone deacetylase complex subunit SAP18.
     
 0.984
RBBP7
Histone-binding protein RBBP7 isoform X1.
    
 0.978
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 0.969
SIN3B
Paired amphipathic helix protein Sin3b isoform X1.
   
 0.940
SIN3A
Paired amphipathic helix protein Sin3a.
   
 0.938
RBBP4
Histone-binding protein RBBP4.
    
 0.916
LOC101371079
Histone-binding protein RBBP4-like.
    
 0.916
LOC101362303
LOW QUALITY PROTEIN: histone-binding protein RBBP4-like.
    
 0.916
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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