STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LECT1Leukocyte cell-derived chemotaxin 1 isoform X1. (361 aa)    
Predicted Functional Partners:
EPYC
Epiphycan.
   
 
 0.732
MATN4
Matrilin-4 isoform X1.
   
 0.615
MATN3
Matrilin-3.
   
 0.574
SCRG1
Scrapie-responsive protein 1.
   
  
 0.560
ACP5
Tartrate-resistant acid phosphatase type 5.
      
 0.528
HAPLN1
Hyaluronan and proteoglycan link protein 1.
   
 0.513
UCMA
LOW QUALITY PROTEIN: unique cartilage matrix-associated protein.
   
  
 0.482
CLEC3A
C-type lectin domain family 3 member A.
    
 0.467
LOC101377295
B-lymphocyte antigen CD20.
   
  
 0.458
WFDC5
WAP four-disulfide core domain protein 5.
   
  
 0.456
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.