STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMCN1Hemicentin-1. (5635 aa)    
Predicted Functional Partners:
PTGS2
Prostaglandin G/H synthase 2.
      
 0.527
AOAH
Acyloxyacyl hydrolase isoform X1.
      
 0.527
SLITRK4
SLIT and NTRK-like protein 4 isoform X1.
    
 0.487
GPR142
Probable G-protein coupled receptor 142; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.482
MYO3B
myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.468
HIF3A
Hypoxia-inducible factor 3-alpha isoform X1.
   
 
 0.444
DOCK2
Dedicator of cytokinesis protein 2; Belongs to the DOCK family.
     
 0.437
NRP1
Neuropilin; Belongs to the neuropilin family.
     
 0.402
SPINK7
LOW QUALITY PROTEIN: serine protease inhibitor Kazal-type 7.
     
 0.402
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.