STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA52ubiquitin-60S ribosomal protein L40 isoform X1. (183 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
0.999
RPS27A
ubiquitin-40S ribosomal protein S27a.
  
0.999
LOC105757892
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
LOC105758044
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.998
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
RPS19
40S ribosomal protein S19.
   
 0.998
RPS28
40S ribosomal protein S28.
  
 0.998
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.998
LOC105757262
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.998
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.