STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAAPhospholipase A-2-activating protein. (582 aa)    
Predicted Functional Partners:
YOD1
Ubiquitin thioesterase OTU1.
    
 
 0.962
UFD1L
Ubiquitin fusion degradation protein 1 homolog isoform X1.
   
 
 0.952
NSFL1C
NSFL1 cofactor p47 isoform X1.
    
 
 0.878
LOC101382159
LOW QUALITY PROTEIN: Fanconi anemia-associated protein of 100 kDa.
   
 
 0.878
NPLOC4
Nuclear protein localization protein 4 homolog.
   
 
 0.878
UBXN2B
UBX domain-containing protein 2B.
    
 
 0.865
VCP
Transitional endoplasmic reticulum ATPase isoform X1; Belongs to the AAA ATPase family.
   
 
 0.836
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.827
UBXN7
UBX domain-containing protein 7.
   
 
 0.809
UBXN1
UBX domain-containing protein 1 isoform X1.
    
 
 0.797
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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