STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERAC1Protein SERAC1. (672 aa)    
Predicted Functional Partners:
TMEM242
Transmembrane protein 242.
      
 0.846
TULP4
Tubby-related protein 4.
      
 0.804
RAPGEFL1
LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor-like 1.
      
 0.758
TFB1M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
  
 0.722
GTF2H5
General transcription factor IIH subunit 5.
      
 0.620
HSDL1
Inactive hydroxysteroid dehydrogenase-like protein 1 isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.612
FAM206A
Protein Simiate.
      
 0.612
SPRYD7
SPRY domain-containing protein 7 isoform X1.
      
 0.612
NIPAL3
NIPA-like protein 3.
      
 0.601
CRYZL1
Quinone oxidoreductase-like protein 1 isoform X1.
      
 0.596
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.