STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101377293LOW QUALITY PROTEIN: CWF19-like protein 2. (896 aa)    
Predicted Functional Partners:
CDC40
pre-mRNA-processing factor 17.
   
 0.961
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.935
SYF2
pre-mRNA-splicing factor SYF2.
    
 0.884
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.863
PRPF8
pre-mRNA-processing-splicing factor 8.
    
 
 0.854
WDR25
WD repeat-containing protein 25.
   
 0.831
PLRG1
Pleiotropic regulator 1 isoform X1.
   
   0.818
SNRPA1
U2 small nuclear ribonucleoprotein A.
    
 
 0.818
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component isoform X1.
    
 
 0.818
BUD31
Protein BUD31 homolog.
    
 
 0.812
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.