STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM56Transmembrane protein 56. (263 aa)    
Predicted Functional Partners:
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.678
RGS7BP
Regulator of G-protein signaling 7-binding protein isoform X1.
      
 0.653
SBK1
Serine/threonine-protein kinase SBK1.
   
  
 0.631
GFI1B
Zinc finger protein Gfi-1b isoform X1.
    
 
 0.581
LRRN4CL
LRRN4 C-terminal-like protein.
      
 0.579
RIOK3
Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses.
      
 0.576
PDCL2
Phosducin-like protein 2.
      
 0.554
TMEM45B
Transmembrane protein 45B.
   
  
 0.547
PLCXD3
PI-PLC X domain-containing protein 3.
      
 0.546
PIP4K2B
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.
      
 0.545
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.