STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTC1Actin, alpha cardiac muscle 1 isoform X1. (377 aa)    
Predicted Functional Partners:
LOC102730020
Myosin-7-like.
   
 0.999
TPM3
Tropomyosin alpha-3 chain isoform X1; Belongs to the tropomyosin family.
   
 0.966
TPM2
Tropomyosin alpha-4 chain isoform X1; Belongs to the tropomyosin family.
   
 0.965
TPM4
Tropomyosin alpha-4 chain; Belongs to the tropomyosin family.
   
 0.965
MYH11
Myosin-11 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.930
SMARCA2
Probable global transcription activator SNF2L2 isoform X1.
    
 0.906
TNNI3
Troponin I, cardiac muscle isoform X1.
   
 0.872
MYL12B
Myosin regulatory light chain 12B isoform X1.
   
 0.865
LOC102738234
Myosin regulatory light polypeptide 9-like isoform X2.
   
 0.865
MYL2
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform isoform X1.
   
 0.865
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.