STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC5Tetratricopeptide repeat protein 5. (458 aa)    
Predicted Functional Partners:
EP300
Histone acetyltransferase p300.
    
 0.978
RPL11
60S ribosomal protein L11 isoform X2; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.956
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.952
RPL3
60S ribosomal protein L3 isoform X1; Belongs to the universal ribosomal protein uL3 family.
   
 0.949
RPL13A
60S ribosomal protein L13a isoform X1; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.949
LOC102741457
60S ribosomal protein L9-like.
   
 
 0.945
LOC102739702
60S ribosomal protein L17-like; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.945
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.944
RPL4
60S ribosomal protein L4 isoform X1.
   
 
 0.939
RPL8
60S ribosomal protein L8.
   
 
 0.936
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.