STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM65CProtein FAM65C. (944 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.847
FREM3
LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3.
    
 0.541
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 
  0.540
GRXCR2
Glutaredoxin domain-containing cysteine-rich protein 2.
     
 0.464
LOC102739012
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.464
GRXCR1
Glutaredoxin domain-containing cysteine-rich protein 1.
     
 0.453
TPRN
Taperin.
     
 0.433
RPS19
40S ribosomal protein S19 isoform X1.
   
 
 0.427
MYO1C
Unconventional myosin-Ic isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.422
TAGAP
T-cell activation Rho GTPase-activating protein.
   
  
 0.405
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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