STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE16Zinc finger FYVE domain-containing protein. (1536 aa)    
Predicted Functional Partners:
LOC102730318
Mothers against decapentaplegic homolog.
    
 0.944
LOC102730764
Mothers against decapentaplegic homolog 2-like.
    
 0.942
LOC102734040
Zinc finger FYVE domain-containing protein 9-like.
    
 
0.898
PTPN23
Tyrosine-protein phosphatase non-receptor type 23 isoform X1.
   
 
 0.849
SMAD9
Mothers against decapentaplegic homolog.
    
 0.679
SMAD4
Mothers against decapentaplegic homolog.
    
 0.669
NUDT3
Diphosphoinositol polyphosphate phosphohydrolase 1.
      
 0.645
SMAD1
Mothers against decapentaplegic homolog.
    
 0.630
METTL9
Methyltransferase-like protein 9 isoform X1.
      
 0.617
LOC102726900
Mothers against decapentaplegic homolog 7-like.
    
 0.601
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.