STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOL4Nucleolar protein 4. (548 aa)    
Predicted Functional Partners:
TEX2
Testis-expressed sequence 2 protein isoform X1.
      
 0.662
BIRC7
Baculoviral IAP repeat-containing protein 7.
      
 0.659
FBXL13
F-box/LRR-repeat protein 13.
   
  
 0.633
FAM185A
Protein FAM185A.
      
 0.614
RAB4B
Ras-related protein Rab-4B isoform X1.
    
 0.567
APH1A
Gamma-secretase subunit APH-1A isoform X1.
      
 0.542
MDM1
Nuclear protein MDM1.
      
 0.542
RAPGEF4
Rap guanine nucleotide exchange factor 4 isoform X1.
   
 0.522
RNF103
E3 ubiquitin-protein ligase RNF103 isoform X1.
      
 0.504
PLCL1
Phosphoinositide phospholipase C.
   
  
 0.496
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.