STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCAAlpha-sarcoglycan. (386 aa)    
Predicted Functional Partners:
SGCD
Delta-sarcoglycan.
   
 0.902
DAG1
Dystroglycan isoform X1.
    
 0.865
LOC102743063
Delta-sarcoglycan-like.
   
 0.828
LOC102749731
Protein KTI12 homolog.
     
 0.812
NMB
neuromedin-B isoform X2.
     
 0.812
LOC102738062
Sarcospan-like.
   
 
 0.794
CAV3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
 
 0.665
DYSF
Dysferlin isoform X1.
      
 0.663
SGCZ
Zeta-sarcoglycan.
   
 0.650
MYOG
Myogenin.
      
 0.609
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.