STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT1Scm-like with four MBT domains protein 1. (372 aa)    
Predicted Functional Partners:
LOC102729593
Scm-like with four MBT domains protein 1-like.
 
     0.929
L3MBTL2
Lethal(3)malignant brain tumor-like protein 2 isoform X1.
 
      0.899
MBTD1
MBT domain-containing protein 1.
 
      0.899
YAF2
YY1-associated factor 2 isoform X2.
    
 0.629
RNF2
E3 ubiquitin-protein ligase RING2 isoform X1.
    
 0.500
RING1
E3 ubiquitin-protein ligase RING1.
    
 0.500
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.464
EED
Polycomb protein EED isoform X1.
   
 0.446
PCGF5
Polycomb group RING finger protein 5.
   
 0.434
PCGF3
Polycomb group RING finger protein 3.
   
 0.423
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.